Hi,
It's nice to see some response. :) But first things first.
> Jmol.js includes not just functions for building Jmol applets, but also
> buttons, checkboxes, etc. linked up to a Jmol applet on the page. Perhaps
> the plugin could implement these functions in some way, as in...
>
> $('#jmolButton').jmolButton();
This is also one of the things that I'm actually trying to avoid. Let
me show you an example. Let's say you have a HTML code that looks like
that:
<p>This is some description about what is going to happen when you
click <a href="/some_molecule.pdb" id="magic">here</a>.</p>
So you add to your javascript file somewere in jQuery's
$(document).ready() part a line:
$('#magic').click(function(e){
e.preventDefault(); // disable default click action
$('#my-jmol-viewer').jmol('load ' + $(this).attr('href')); // or any
other command
});
See what I've done here? First time you call my jmol plugin on some
placeholder <div>, it gets replaced with a Jmol applet object. Next
time you can send direct script messages to it. Also if there is no
JavaScript a client can download pdb file directly, and we don't
interrupt his user experience on the web.
Now even more magic:
$(document).ready(function(){
// Initialize Jmol with jMol when document has loaded
$('#my-jmol').jmol({
// Some settings
onLoad : function(url){
// when the molecule has been loaded, we set the page on fire
$('#magic').parent().html('Tadaaa!');
}
});
$('#magic').click(function(e){
e.preventDefault(); // disable default click action
$('#my-jmol-viewer').jmol('load /some_molecule.pdb'); // or any
other command
});
});
> I would also be interested in setting Jmol parameters thusly:
>
> $('#Jmolapplet').jmol({ parameter: 'bondmodeor', value: true });
>
> In my fork, I've added a parameters object to _defaults that contains all
> the Jmol parameters as of 12.2.10; you might find that a useful reference. I
> also added a simple bit of code to _proc that allows one to set Jmol
> parameters using the above syntax.
>
> https://github.com/mevans86/jMol
Oh, nice, this should be sorted out a bit, but it's nice to see. I'll
look more into that tomorrow.
--
Gusts Kaksis
Web Developer
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