Bugs item #3561720, was opened at 2012-08-25 09:13 Message generated for change (Comment added) made by hansonr You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=3561720&group_id=23629
Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Application Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: k. siegmund (iridos) Assigned to: Bob Hanson (hansonr) Summary: Please don't auto-detect of best representation on load Initial Comment: Hi, when loading files from the gui interface, the types of molecules in the file is auto-detected and the appropriate representation chosen. This _only_ happens when a (pdb) file is loaded from the gui, not when a pdb entry is fetched from the net or a file is specified via the commandline. What's worse, autodetect sometimes fails (e.g. on single amino/nucleic acids e.g. guanosine) and no molecule is shown. Please make it an option in GUI to switch between default and autodetected representation. Cheers, I. ---------------------------------------------------------------------- >Comment By: Bob Hanson (hansonr) Date: 2012-08-25 16:14 Message: Also -- I don't see how there could be no difference between any of these loads -- the exact same methods are executed. So very important to provide the exact commands you are giving that seem to be causing the problem. Version of Jmol? ---------------------------------------------------------------------- Comment By: Bob Hanson (hansonr) Date: 2012-08-25 15:12 Message: Sorry, you will have to be more specific. What exactly are you trying to do, what is the site in question, and where is the problem? It sounds to me like the site you are using for the source of files is not serving up good PDB files. I'd like to see some of them... ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=379133&aid=3561720&group_id=23629 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Jmol-developers mailing list Jmol-developers@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-developers
