That said, we do now have the following, which is largely untested:
JmolVersion="13.1.13"
new feature: animation MORPH n
- where n is a number of frames to be inserted between trajectories
- requires previous LOAD TRAJECTORY
or the loading of a PyMOL PSE file having a movie (automatically a
trajectory)
- Jmol will do a linear morph as the animation runs.
- for example:
load test.pse
animation morph 3
- could be used for a linear morph between just two structures:
load trajectory "test1.pdb" "test2.pdb"
animation morph 32 // animation will run 33 frames
Neal, are you saying you want to contribute to Jmol in the area of
morphing? I'd like to hear more if that's what you are suggesting.
Bob Hanson
On Wed, Apr 17, 2013 at 9:14 AM, Angel Herráez <angel.herr...@uah.es> wrote:
> Hello Neal, welcome
>
> > 1) For the morphing/animation, do you use some models from the same
> > protein and just show and hide them to make an animation ?
>
> Yes, Jmol just displays in sequence whatever set of models is loaded
> into it. You can control speed, direction, repetition and range of
> models displayed.
>
>
> > 2) Do you use MorphServer or something like that to create your
> > animation ?
> > How your morphing method works ?
>
> Ther is no morphing inside Jmol. You may get models that you have
> prepared using MorphServer, but Jmol bears no relation with that.
>
>
>
>
>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Precog is a next-generation analytics platform capable of advanced
analytics on semi-structured data. The platform includes APIs for building
apps and a phenomenal toolset for data science. Developers can use
our toolset for easy data analysis & visualization. Get a free account!
http://www2.precog.com/precogplatform/slashdotnewsletter
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