Manish,
First use the select command as detailed at the page Tim referred you to:
http://www.stolaf.edu/people/hansonr/jmol/docs/
Then follow it with a rendering command such as spacefill, also detailed at the URL above.
It might be a good idea to take a look at the examples at the jmol demonstration page to see how the scripting language works:
http://jmol.sourceforge.net/demo/
Frieda
On Mar 22, 2005, at 12:59 AM, Manish Agrawal wrote:
Hi Tim,
Thank you very much for your help. "restrict not hydrogen" works fine for turning hydrogen off, but I am not able to find reverse command to turn hydrogen on in the document. Could you please help me with this.
Thanks & Regards Manish Agrawal [EMAIL PROTECTED] http://www.strandgenomics.com Phone: (080) 2361 1349-52/2361 8992-95
instead.On 2005-03-22 (10:25) Manish Agrawal wrote:
Hi,
I am trying this command to turn off display of hydrogen atoms: "set hydrogens off". It's not doing anything. Do I need to change any other display settings?
The reason I am executing this command is, when I am displaying a molecule I want to display it without hydrogen.
hi Manish,
I don't think that syntax is correct. try "restrict not hydrogen"Albert Einstein
btw, script commands are well-documented by Bob Hanson here:
<http://www.stolaf.edu/people/hansonr/jmol/docs/>
regards,
tim -- Timothy Driscoll molvisions - see, grasp, learn. <http://www.molvisions.com/> usa:north carolina:raleigh
"Everything should be made a simple as possible, but not simpler." -
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************************************* Frieda S. Reichsman, PhD Molecules in Motion Interactive Molecular Structures http://www.MoleculesInMotion.com Shutesbury, MA *************************************
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