Miguel sent (2004.05.28 at 5.11p [+0200gmt]) : > Tim wrote: > > greetings, > > > > OXT is the accepted atom id to indicate the terminal oxygen of a protein > > chain. I am trying to find out the standard atom ids that are used for > > other 'terminator' atoms as well. can anyone please point me to pdb > > files that contain the following... > > > > > > protein: > > > > a pdb (nmr) file that contains a chain with its full COOH of the > > C-terminal residue (the O is OXT; what is the H?). > > > > a pdb (nmr) file that contains a chain with its full NH2 of the > > N-terminal residue. > > Out of curiosity ... why do you need the H atoms? > see next answer ;-)
> If present, do you think that they should be part of the 'backbone' > set ? > yes, they should be. (this is not precisely how Chime does it, but I consider that a bug.) regards, tim ------------------------------------------------------- This SF.Net email is sponsored by: Oracle 10g Get certified on the hottest thing ever to hit the market... Oracle 10g. Take an Oracle 10g class now, and we'll give you the exam FREE. http://ads.osdn.com/?ad_id149&alloc_id�66&op=click _______________________________________________ Jmol-users mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-users
