Andreas, when you say "load different pdb files" do you mean files for the same protein but with different secondary structure definitions in the PDB file, or do you mean totally different proteins?
Bob
Miguel wrote:
Hi!
I am using Jmol integrated into another Java program ( as in examples/Integration.java) and I am very happy about it! :-)
Very good.
Is there a way to set the secondary structure from the "outside" of Jmol ? E.g. to use different assignments for the same protein, without having to load a new PDB file every time.
That is a very good question.
At the present time you cannot do this ...
HOWEVER ... ... I will make a deal with you ... I will add this capability for you ... the ability to define secondary structure through the scripting language and/or the API ... if you will help me implement the algorithms for 'auto-calculating' secondary structures when they are not present in the file.
What do you think ... do we have a deal?
Miguel
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Robert M. Hanson, [EMAIL PROTECTED], 507-646-3107 Professor of Chemistry, St. Olaf College 1520 St. Olaf Ave., Northfield, MN 55057 mailto:[EMAIL PROTECTED] http://www.stolaf.edu/people/hansonr
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