Petr wrote:
> In the meantime, I figured out, that by issuing <select oxygen> I can save
> lots of clicking, as long as the oxygen atoms=red color is what I want to
> select, which I control by the matrx->xyz conversion routine.
> Where the indices of those selected O-atoms can be found/passed? Thanks.

I think that you are asking how to enumerate the set of selected atoms.

Unfortunately, that functionality does not currently exist in the
JmolViewer API.


Miguel



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