On Feb 9, 2005, at 9:38 AM, [EMAIL PROTECTED] wrote:
On Wed, February 9, 2005 9:27 am, timothy driscoll said:On 2005-02-08 (14:35) S. Frank Yan wrote:
Hi,
I was wondering if there is a way in Jmol to select those hydrogen atoms that are bonded to nitrogen atoms. I could do this by distance; however, it might be better to say something like "select hydrogens connected to nitrogens". =20
why not by distance?
select hydrogen and within(2.5,nitrogen)
(the bond distance is off the top of my head.)
1.15 for the distance
Does this also select the N atoms? ( not at a platform I can test it)
To get the nitrogens too you can do
select hydrogen and within(1.15,nitrogen) or nitrogen and within(1.15,hydrogen)
I gave it a try and it seems to work. Is there a better way? Probably. I am fairly new at this.
Chris
Rich
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