Angel wrote: > On Jmol's pop-up menu there are entries: > Select > Other > Carbohydrate > Select > Other > Lipid > > How do these work?
They do not work. I did not realize that they were part of the popup menu system ... I apologize. Tim and I identified these as 'reserved words' and put them on our wish-list, but it is not implemented. > I mean, how are the "Carbohydrate" and "Lipid" > components identified in the moelcular coordinate file? > This is a nice option for glycoproteins and glycolipids, but I'm afraid > that PDB spec doesn't provide for it; it could be used profitably by > editing the pdb to enter the appropiate IDs, so I want to know which they > are. The idea was/is for Jmol to recognize these things automatically, using pattern searching within the structure. Jmol does some recognition of 'proteins', distinct from the 'chain identifier' specified in pdb & mmcif files. We would like to apply some similar substructure searching to identify lipids & carbohydrates ... but nothing has been done. Lo siento :-( Miguel ------------------------------------------------------- SF email is sponsored by - The IT Product Guide Read honest & candid reviews on hundreds of IT Products from real users. Discover which products truly live up to the hype. Start reading now. http://ads.osdn.com/?ad_ide95&alloc_id396&op=click _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
