On 2005-04-05 (17:36) [EMAIL PROTECTED] wrote:
>I'd like to get a table of the numerical values for the atom colours
>in Jmol. The website has a link to Colors but that has no
>information on atom colouring (neither is the Wiki informational
>about this). So: (1) how can I get the list of RGB values and (2)
>shouldn't this be an item in the documentation/wiki?
>
>Rich
>
hi Rich,
I'm assuming that you mean atom colors according to the default "color by
element" scheme. Jmol uses a variant of the CPK scheme. if you have access to
the source, you can find the values in
Jmol-HEAD/src/org/jmol/viewer/JmolConstants.java, or I've pasted them below:
0xFFFFFFFF, // H 1
0xFFD9FFFF, // He 2
0xFFCC80FF, // Li 3
0xFFC2FF00, // Be 4
0xFFFFB5B5, // B 5
0xFF909090, // C 6 - changed from ghemical
0xFF3050F8, // N 7 - changed from ghemical
0xFFFF0D0D, // O 8
0xFF90E050, // F 9 - changed from ghemical
0xFFB3E3F5, // Ne 10
0xFFAB5CF2, // Na 11
0xFF8AFF00, // Mg 12
0xFFBFA6A6, // Al 13
0xFFF0C8A0, // Si 14 - changed from ghemical
0xFFFF8000, // P 15
0xFFFFFF30, // S 16
0xFF1FF01F, // Cl 17
0xFF80D1E3, // Ar 18
0xFF8F40D4, // K 19
0xFF3DFF00, // Ca 20
0xFFE6E6E6, // Sc 21
0xFFBFC2C7, // Ti 22
0xFFA6A6AB, // V 23
0xFF8A99C7, // Cr 24
0xFF9C7AC7, // Mn 25
0xFFE06633, // Fe 26 - changed from ghemical
0xFFF090A0, // Co 27 - changed from ghemical
0xFF50D050, // Ni 28 - changed from ghemical
0xFFC88033, // Cu 29 - changed from ghemical
0xFF7D80B0, // Zn 30
0xFFC28F8F, // Ga 31
0xFF668F8F, // Ge 32
0xFFBD80E3, // As 33
0xFFFFA100, // Se 34
0xFFA62929, // Br 35
0xFF5CB8D1, // Kr 36
0xFF702EB0, // Rb 37
0xFF00FF00, // Sr 38
0xFF94FFFF, // Y 39
0xFF94E0E0, // Zr 40
0xFF73C2C9, // Nb 41
0xFF54B5B5, // Mo 42
0xFF3B9E9E, // Tc 43
0xFF248F8F, // Ru 44
0xFF0A7D8C, // Rh 45
0xFF006985, // Pd 46
0xFFC0C0C0, // Ag 47 - changed from ghemical
0xFFFFD98F, // Cd 48
0xFFA67573, // In 49
0xFF668080, // Sn 50
0xFF9E63B5, // Sb 51
0xFFD47A00, // Te 52
0xFF940094, // I 53
0xFF429EB0, // Xe 54
0xFF57178F, // Cs 55
0xFF00C900, // Ba 56
0xFF70D4FF, // La 57
0xFFFFFFC7, // Ce 58
0xFFD9FFC7, // Pr 59
0xFFC7FFC7, // Nd 60
0xFFA3FFC7, // Pm 61
0xFF8FFFC7, // Sm 62
0xFF61FFC7, // Eu 63
0xFF45FFC7, // Gd 64
0xFF30FFC7, // Tb 65
0xFF1FFFC7, // Dy 66
0xFF00FF9C, // Ho 67
0xFF00E675, // Er 68
0xFF00D452, // Tm 69
0xFF00BF38, // Yb 70
0xFF00AB24, // Lu 71
0xFF4DC2FF, // Hf 72
0xFF4DA6FF, // Ta 73
0xFF2194D6, // W 74
0xFF267DAB, // Re 75
0xFF266696, // Os 76
0xFF175487, // Ir 77
0xFFD0D0E0, // Pt 78 - changed from ghemical
0xFFFFD123, // Au 79 - changed from ghemical
0xFFB8B8D0, // Hg 80 - changed from ghemical
0xFFA6544D, // Tl 81
0xFF575961, // Pb 82
0xFF9E4FB5, // Bi 83
0xFFAB5C00, // Po 84
0xFF754F45, // At 85
0xFF428296, // Rn 86
0xFF420066, // Fr 87
0xFF007D00, // Ra 88
0xFF70ABFA, // Ac 89
0xFF00BAFF, // Th 90
0xFF00A1FF, // Pa 91
0xFF008FFF, // U 92
0xFF0080FF, // Np 93
0xFF006BFF, // Pu 94
0xFF545CF2, // Am 95
0xFF785CE3, // Cm 96
0xFF8A4FE3, // Bk 97
0xFFA136D4, // Cf 98
0xFFB31FD4, // Es 99
0xFFB31FBA, // Fm 100
0xFFB30DA6, // Md 101
0xFFBD0D87, // No 102
0xFFC70066, // Lr 103
0xFFCC0059, // Rf 104
0xFFD1004F, // Db 105
0xFFD90045, // Sg 106
0xFFE00038, // Bh 107
0xFFE6002E, // Hs 108
0xFFEB0026, // Mt 109
you're right; this should be documented somewhere...
regards,
tim
--
Timothy Driscoll
molvisions - see, grasp, learn.
<http://www.molvisions.com/>
usa:north carolina:raleigh
"Choices we are given, it's no choice at all." - Dixie Chicks
-------------------------------------------------------
SF email is sponsored by - The IT Product Guide
Read honest & candid reviews on hundreds of IT Products from real users.
Discover which products truly live up to the hype. Start reading now.
http://ads.osdn.com/?ad_ide95&alloc_id396&op=click
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
