It is working now. Thanks. Regards, Clodoaldo
On 5/17/05, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote: > > De: Clodoaldo Pinto <[EMAIL PROTECTED]> > > > >I searched the list but can't find the correct format for the fah xyz > >text to feed the jmolAppletInline javascript function. > > There is no description of the fah xyz file format. It was try and guess to > find how to read them. > > >I'm trying to build a very simple jmol extension to mediawiki. To show > >a jmol applet with the desired molecule: > > > ><jmol>contents of the fah xyz file</jmol> > > > >A php parsing on the fah xyz file content produces a text which is > >passed to the jmolAppletInline javascript function: > > > >jmolAppletInline(400, > >'748\n'+ > >'p1416_polyQ_beta-helix\n'+ > >'1 N 4.336784 27.183590 36.134543 2 > >747\n'+ > >'2 H 4.042975 27.173009 37.100809 1\n'+ > >.... > >'748 HA 5.637846 28.861172 36.155944 747\n', '', > >'FahWiki'); > > > >The problem is that it is not working. The Jmol version is 10.00.11. > > The problem is in the file format : the project number and the project name > MUST be on the same line for Jmol to identify the file as a FAH xyz file. > Otherwise, Jmol will believe it is a regular xyz file. > > Simple description of the format: > First line: <number of atoms> <project name> > Next lines: <atom number> <symbol> <x> <y> <z> <bond1> <bond2> ... > > Hope this helps > Nicolas > > > ------------------------------------------------------- > This SF.Net email is sponsored by Oracle Space Sweepstakes > Want to be the first software developer in space? > Enter now for the Oracle Space Sweepstakes! > http://ads.osdn.com/?ad_idt12&alloc_id344&opclick > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users > ------------------------------------------------------- This SF.Net email is sponsored by Oracle Space Sweepstakes Want to be the first software developer in space? Enter now for the Oracle Space Sweepstakes! http://ads.osdn.com/?ad_idt12&alloc_id344&op=click _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
