At 6/6/05, you wrote:
Eric Martz wrote:
Dear Jmol Team:
I would like to bundle the binaries of the Jmol Applet with the next
release of Protein Explorer. That means when people download Protein
Explorer, it will include the Applet.
wow, great!
If you reference the online scripting documentation I'm managing, please
refer to it simply from:
http://jmol.sourceforge.net/docs/
Bob Hanson
Dear Bob,
OK, will do. However, the goal of Protein Explorer is that you should not
need to know any RasMol/Chime command scripting language in order to use it
effectively and in considerable depth.
Protein Explorer does include a command input slot to Chime, and a message
box for reports back from Chime. So people who want to learn command
language and use it may do so.
The export to Jmol of molecular views developed with Chime in Protein
Explorer is in its infancy and will undoubtedly evolve quite a bit in the
coming year. At present, even script-savvy users would not be entering
Jmol-specific commands into Protein Explorer. I always appreciate feedback
on its design.
In the long run I expect to try porting Protein Explorer to use Jmol
instead of Chime, but that is a different project not yet started.
-Eric
/* - - - - - - - - - - - - - - - - - - - - - - - - - - -
Eric Martz, Professor Emeritus, Dept Microbiology
U Mass, Amherst -- http://www.umass.edu/molvis/martz
Protein Explorer - 3D Visualization: http://proteinexplorer.org
Workshops: http://www.umass.edu/molvis/workshop
Biochem Structure Tutorials http://MolviZ.org
World Index of Molecular Visualization Resources: http://molvisindex.org
ConSurf - Find Conserved Patches in Proteins: http://consurf.tau.ac.il
Atlas of Macromolecules: http://molvis.sdsc.edu/atlas/atlas.htm
PDB Lite Macromolecule Finder: http://pdblite.org
Molecular Visualization EMail List (molvis-list):
http://bioinformatics.org/mailman/listinfo/molvis-list
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