> A further suggestion refers to the rendering of SS bonds. Currently,
> these bonds
> link either sidechain or backbone atoms. A third useful option would be to
> extend the lines to the cartoon ribbon.
> An example, how this could look like, can be found here:
> http://www.imb-jena.de/cgi-bin/htmlit.pl?color=white&id=1pi2&src=1pi2_prepi_1.gif&name=mono%201pi2
>

Jurgen,

Try this and see if it is 'good enough'

load "1CRN.pdb";
spacefill off; wireframe off;
cartoon on;
ssbonds 0.2; set ssbonds backbone;
color ssbonds yellow; # looks like a bug - I should not have to do this

I realize that the bonds to not extend all the way to the cartoon, but the
effect may be close enough.

Tell me what you think.


Miguel



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