Quoting Miguel <[EMAIL PROTECTED]>:
It is not clear to me where you want to take this disussion.
I started this discussion to help us to decide what we should use for
highlighting boundaries between two amino acids: 'pmesh' or 'pseudo atoms +
bonds'. With the current state of Jmol we could only use pmesh combined with a
pseudo atom for labelling. Therefore we would most probably use 'pseudo
atoms +
bonds' although the highlighting wouldn't be as good as with 'pmesh'.
Because I
don't want to force adding features for 'misusing' bonds I didn't went further
in that direction. If pmesh labelling would be added we would presumably use
'pmesh', even with a lot of different files.
I like Timothy's idea of a new annotation object best, because it would
make any
precomputing and/or changing of the PDB files unnecessary. But I guess
it would
be more work than adding a lablling command for 'pmesh'.
Regards,
Rolf
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