Hi,
De: "Kevin Dunn" <[EMAIL PROTECTED]>
>
>I would like to use a different color for hydrogen atoms attached to N or O
>than those attached to C. What is the easiest way to do this using a pdb file?
>
>I tried just "lying" in the pdb, calling some hydrogens "Li", but this seems
>ugly and the van der Waals radii are wrong.
>
>If I call some atomd HA and some HB is there a way to give them different
>colors?
Simply loads your file, select the atoms you want to change color and change
their color. Use commands like that:
select substructure("[H][N]") and substructure("[H]");
color atoms blue;
The substructure command is only available in the pre-release version of Jmol
(you can use it), but there's probably an other way to select only the atoms
you are interested in.
Nico
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