Tamas wrote:

> but that would mean I would need to copy
> my reference structure as separate chain to every model.
[snip]
> And why load my reference chain 1000 times, when it
> is the same all the time?

OK ... now I understand what is going on.

When you said '2 chains' I thought that meant that there really are two
separate chains, with changes in atom positions along both chains.

I now understand that you simply want one model to be static and
unchanging.


Someone wrote:
> if so, you could just add your reference as a separate
> model in your multi- model file - no need to add it as
> a chain to every model.  Jmol has
> decent tools to manipulate models.

I think that this is the right path for us to pursue.

Given the current architecture, I think this is the most effective way to
get all the atoms into memory.

We can work separately on extending the scripting and/or animation
commands to support the functionality that you are looking for.


Miguel



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