Miguel, Answers below.
Hervé -----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Miguel Sent: mercredi 22 mars 2006 17:29 To: [email protected] Subject: Re: [Jmol-users] Support of V3000 Mol format Hervé, Per Egon's message ... the V3000 format is not currently supported in native Jmol. That is, the CDK reader is not used by Jmol. Adding a new reader to Jmol is generally not difficult. You indicated that your situation was *urgent*. It would be useful for us to have some more information: Q: Are you using the Jmol application, the Jmol applet, or the Jmol viewer as a Java component? [Hervé Azoulay] JMOL Applet The V3000 file format allows one to store more information than many file formats ... Q: Do you need anything other than atoms, bonds, and formal charges? [Hervé Azoulay] No. Atoms and bonds could be enough One way to think about this is ... would simple .xyz files or .mol files meet your needs? [Hervé Azoulay] Actually I'm currently generating mol files that I display with the *free* chime plug-in from MDL. But it's a Windows plug-in only .... Q: Are you using reactions or anything like that? [Hervé Azoulay] No The format supports *wildcard* atom types that are unnamed. Jmol cannot deal with this situation ... Q: Do any of you files contain *wildcard* atoms? [Hervé Azoulay] Hard to say but I don't think so Miguel ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd_______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnk&kid0944&bid$1720&dat1642 _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
