Jan wrote: > not a script, but while interacting with 1ton, cartoon; dots; wireframe; > connect modify double (oxygen and bondcount=1) (carbon); during mouse > rotate: > Exception in thread "AWT-EventQueue-0" > java.lang.ArrayIndexOutOfBoundsException: 188856 > at org.jmol.g3d.Graphics3D.plotPixelsClipped(Graphics3D.java:1260) > at > org.jmol.g3d.Circle3D.plot8FilledCircleCenteredClipped(Circle3D.java:133) > at > org.jmol.g3d.Circle3D.plotFilledCircleCenteredClipped(Circle3D.java:163) > ... > > I could reproduce with: > load pdb 1ton.pdb;cartoon; dots; wireframe; connect modify double > (oxygen and bondcount=1) (carbon);set display selected;cpk off;dots off; > and rotated and zoomed that a bit with the mouse.
Excellent. The problem occured with 'halos'. The key part of this was 'set display selected'. Turning off spacefill and reducing to 'wireframe on' also helped. I think this bug has been lurking there ever since 'translucent' was introduced. I have checked in the fix. Miguel ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnk&kid0944&bid$1720&dat1642 _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
