Re: [Jmol-users] Jmol prerelease 10.00.60 (latest before official release)

[Frieda Reichsman]

On Apr 10, 2006, at 3:24 PM, Bob Hanson wrote: your mac must be caching the jar files, then, because it doesn't do that for me. I will check. What do you consider to be the "moving camera" effect that you are seeing? Won't bother with this until after I check above. > center 401:1 > # (chain designator is '1' for some reason) now THAT'S a bug. I'll look into it. No! The # comment was just explanatory - '1' is the chain designation in the pdb file! Frieda Bob Frieda Reichsman wrote: On Apr 10, 2006, at 12:36 PM, Bob Hanson wrote: On your test page, I still see the effect after issuing set windowCentered on By "your test page" I think (I HOPE) you are referring to that set of jar files I zipped up <http://www.stolaf.edu/people/hansonr/jmol/ test/jmol-new-proto.zip>. Is that right? Nope. Sorry - I am referring to http://www.stolaf.edu/people/hansonr/jmol/test/10.1/new.htm I click the red link to load kinesin.pdb then I type the command: center 401:1 # (chain designator is '1' for some reason) this centers an ADP that is bound to one of the kinesin chains. Manually rotating now shows the moving camera effect, and setting  windowcentered ON or OFF seems to me to make no difference in how the  structure rotates.... OK, looks like I forgot to upload a set of jar files to my  prototype directory from my last edit of April 6. Thank you for  pointing that out, Frieda. I've regenerated that zip file if you  are interested in further testing of it. "set windowCentered OFF"  is required to see the camera-move effect. I will check whether the windowCentered on/off makes a difference  with the new zip files. Did Chime have the equivalent of "set windowCentered OFF"? Chime had "set zoom center off" which was similar, and very handy. Frieda /////////////////////////////////////////// Frieda Reichsman, PhD Molecules in Motion Interactive Molecular Structures http://www.moleculesinmotion.com /////////////////////////////////////////// --  Robert M. Hanson, [EMAIL PROTECTED], 507-646-3107 Professor of Chemistry, St. Olaf College 1520 St. Olaf Ave., Northfield, MN 55057 mailto:[EMAIL PROTECTED] http://www.stolaf.edu/people/hansonr "Imagination is more important than knowledge."  - Albert Einstein ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnk&kid=110944&bid=241720&dat=121642 _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users /////////////////////////////////////////// Frieda Reichsman, PhD Molecules in Motion Interactive Molecular Structures http://www.moleculesinmotion.com ///////////////////////////////////////////