On Wednesday 26 April 2006 07:42, Egon Willighagen wrote:
> Which AtomIterator field need to be setup correctly to have Jmol detect
> atoms as protein atoms?

The important field turned out to be the group3 field. 

A screenshot of the state of Bioclipse today is at:

http://bioclipse.net/

I think I mentioned it before, but will do it again to make sure :), it has a 
built in script editor with code completion and syntax highlighting. The 
screenshot shows a file browser on the left, the console below the Jmol 
window and enzyme properties on the right. It currently has no 
AtomSetChooser, but that might follow soon.

Binaries can be downloaded form bioclipse.sf.net, and the source is available 
from SVN, and easiest run from Eclipse.

Egon

-- 
CUBIC
blog: http://chem-bla-ics.blogspot.com/


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