Bob Hanson wrote: >Does anyone know of a website that lets you indicate any PDB file and then > >1) show the Ramachandran plot > >and, preferably, > >2) allow clicking on the plot to see which residues are involved? > > The 'AstexViewer' from MSD at the EBI. It is a java applet. In the 'Graphs' menu there is a 'Rama' entry and you get an interactive window where you can click on a spot in the ramachandran plot and the corresponding residue is shown and in the structure viewer it is centered and zoomed in on it.
It should work with any PDB code, for example: http://www.ebi.ac.uk/msd-srv/apps/Viewer/ViewerServlet?id=1deh Regards, Rolf ------------------------------------------------------------------------- Using Tomcat but need to do more? Need to support web services, security? Get stuff done quickly with pre-integrated technology to make your job easier Download IBM WebSphere Application Server v.1.0.1 based on Apache Geronimo http://sel.as-us.falkag.net/sel?cmd=lnk&kid=120709&bid=263057&dat=121642 _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
