Q: What do you get when you combine?
- isosurface WITHIN x.xx [some point or atom] # just now added
- translucent surfaces
- navigation
A: A guided tour of a protein binding site.
The key commands are:
isosurface s1 within 10.0 (atomno=185) sasurface colorscheme rwb color
absolute 0 20 map property temperature translucent 0.2;# ({0:2180})
({1749:1758 1760:2180})
isosurface s2 within 8.0 (atomno=433) sasurface colorscheme rwb color
absolute 0 20 map property temperature translucent 0.2;# ({0:2180})
({1749:1758 1760:2180})
draw arrow1 ARROW {18.50816 -5.9783783 6.6065865} {22.577888 2.2955093
17.283516} {36.745804 12.123276 29.579498} {37.168575 15.102219 37.04515};
draw off;
navigate 10 PATH $arrow1
The arrow was set up just be using
draw arrow1 arrow {0 0 0} {10 10 10} {20 20 20} {30 30 30}
set picking draw
and then moving it around by hand until it fit the cavity.
Bob
-------------------------------------------------------------------------
Take Surveys. Earn Cash. Influence the Future of IT
Join SourceForge.net's Techsay panel and you'll get the chance to share your
opinions on IT & business topics through brief surveys-and earn cash
http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
