On Apr 30, 2007, at 11:01 PM, Bob Hanson wrote:

> Tim, I think you will like how this works. The idea is to set up a
> property (like temperature, but of your own definition) and then  
> use it
> in the command
>
> color atoms property_x
>
yes, I definitely like this feature already.  that much is certain. :-)

>
> Make sure the data are a single column -- the second of what you show
> below. Then just
>
> color atoms [cartoons, trace, etc.] property_tim
>
> The idea is that once you have assigned the property to the atoms with
> the data statement, then
> you can color them using it.
>
ah, so the properties are assumed to be consecutive according to atom  
number?


> If you don't have data for all the atoms, just supply the necessary  
> data
> for the SELECED atoms.
and if I have multiple files loaded (via load files ""), I guess I  
can load different datasets - I'll give this a try in the morning...

definitely intrigued to see this in action.  especially applied to  
cavity isosurfaces, my "Jmol Feature of the Month" for March.


regards,

tim
-- 
Timothy Driscoll                                em: [EMAIL PROTECTED]
Virginia Bioinformatics Institute               ph: 540-231-3007
Bioinformatics I: M-1                           im: molvisions
Washington St., Blacksburg, VA 24061

04-16-07.  We will not forget.



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