> >Sigh. There's probably a good reason why none of the protein graphics > >programs calculate the mainchain-sidechain H-bonds.
Probably, that it is not a trvial and generalizable task. David, if you already have a program that computes the Hbonds, I think you should use that data, rather than asking Jmol to compute them again. I agree with Bob that you could possibly pass that info to a Jmol script --doesn´t mean generating different pages-- > >When > >a user makes a query for a particular motif in a particular, the > >residues are retrieved (as residue numbers), and this info is used to > >generate a pop-up page with the appropriate PDB file displayed in > >Jmol and the buttons scripted to to highlight or restrict the display > >to the motif. (...and the Hbonds info is also retrived and used while generating the page or the buttons) ------------------------------------------------------------------------- This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 express and take control of your XML. No limits. Just data. Click to get it now. http://sourceforge.net/powerbar/db2/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
