Raphael A. Bauer wrote: > background white; select all; wireframe off; backbone off; spacefill > off; trace on; > > on a protein with ligands bound to it. unfortunately i am getting the > normal trace plus a trace that seems to connect all ligands (looks like > a giant signature of a MD).
That's strange. No idea. Seems like the ligand are being taken as residues. > is this the indended behaviour? Certainly not. Trace should only render for proteins and nucleics (carbohydrates in some cases) > provide the original pdb + a pic of that (i did not want to send this > over this list). You can send me the pdb if you want, I'll have a look Please say also which Jmol version you are using. > apart from that - is there a "workaround" for this something like > "hide ALLNONPROTEINATOMS". i guess that would eliminate the problem in > my case(s). Have you tried "hide not protein"? It means exactly that. ------------------------------------------------------------------------- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
