Hi Angel, thank you for the quick feedback and your valuable suggestions!
In fact, the display for real input was already generated with 2 separate models, I only missed to do this with the precalculated example shown by default. I have adapted the example and added two buttons to selectively view query and/or target. Thanks also for the hint on the memory leak fix, I will try some newer versions of the applet as soon as possible. TopMatch-web can now also be found on the listing of the Jmol Wiki. Best, -Markus On Die, 25 Mär 2008, Angel Herraez wrote: > Markus, congratulations for the site > > This looks like a very promising tool. I look forward to having a > test case where I can test your service. > > I have a couple of suggestions: > > 1.- It would be more useful to generate the display with 2 > models/frames, rather than a pdb file with the 2 chains fused into > the same model. There are two ways to do that: > a) Insert MODEL / ENDMDL records in the pdb file that contains the 2 > structures. > b) Use Jmol "load files" or "load append" capabilty to load the 2 pdb > files sequentially (same files you are providing in the download). > > That will open up the possibility of easily alternating between both > structures, or show both, using the "model" submenu in the popup, or > the animation controls (you could provide some controls for that in > your page, e.g.: > radio buttons: ( )query ( )target (o)both > and/or: ( )animate (o)stop. > > 2.- You mention a potential browser locking problem after several > sessions; you may be interested in updating the applet, as on recent > versions a memory leak has been fixed (see the jmol-users list). > > 3.- Make sure to add your site to the listing at Jmol Wiki > > Regards > > > ------------------------------------------------------------------------- > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users > ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.net/marketplace _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
