Bob Hanson wrote: > biomolecule oriented Jmol users: > > I suspect as people play with this more, they will want me to expand on > that load filter select option. What else? >
It would be nice to have a "color by symop" command (e.g.: color cartoon symop). I know that it is difficult to define different large color sets. In the case of biological units our solution was to use the reverse Jmol chain coloring scheme for coloring the different copies of the asymmetric unit plus "antiquewhite" for the original part. So for most PDB entries there is no overlap between the colors. And even for the other cases the user will at least see a difference when switching between the 2 sets. I guess it would be possible with the new Jmol scripting possibilities to do this "by script". But it will be rather complicated and will at least result in very large scripts. (We are doing this now for "color by model", but still aided by information from our database. For 60 models the command for atom coloring by model is for example 2089 characters long.) Regards, Rolf ------------------------------------------------------------------------- This SF.net email is sponsored by the 2008 JavaOne(SM) Conference Don't miss this year's exciting event. There's still time to save $100. Use priority code J8TL2D2. http://ad.doubleclick.net/clk;198757673;13503038;p?http://java.sun.com/javaone _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
