Hi All,
When I use these two commands, select protein; isosurface cavity3 minset
500 pocket color yellow cavity translucent, with myoglobin (1mbo), I obtain
two cavities. If I add ignore hem to give isosurface cavity3 minset 500
pocket ignore hem color yellow cavity translucent, I just obtain the cavity
that is binding the heme. I would have expected to get the two other
cavities along with the heme binding cavity. Am I missing something?
Karl
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