Bob,

11.6.RC8 works fine for several of my web pages that use a variety of  
renderings, animations, echos, labels, centering commands, antialias  
toggle, spin, a looping script, and simple user-defined variables and  
functions. Fantastic! (...but not unexpected! :)

Regarding syncing mouse gestures: sync across 2 applets using
sync * on; sync * "set syncMouse true"
works perfectly.

The quaternion sync scheme that you suggested to me works perfectly in  
my amino acid comparison page, except for 2 amino acids. I am not sure  
what this means, but here are the details in case they are relevant:

All the scripts that are called (for each amino acid) are the same  
except for the moveto command that initializes the position of each  
amino acid, and some definitions. I cannot see anything wrong with the  
moveto commands for these two amino acids, which work fine both when  
sync is not on, and when sync is on *without* the quaternion  
functions. With the quaternion commands invoked, these two amino acids  
take up anomalous positions that are translationally offset from where  
they should be, and they rotate around a point that is outside the  
amino acid, though their orientation is correct aside from that.

The other difference of course is the coordinate files but I cannot  
see anything wrong when comparing these two mol2 files to the other  
amino acid files.

If you want to look at this, the page is here:
http://moleculesinmotion.com/aminoacids-sync/
and the amino acids that are not positioned correctly are arginine and  
histidine. (Note, some of the EPS values are not yet correct, please  
ignore).

If it would be helpful I'd be happy to spell out what is in all the  
scripts, rather than you having to poke around; just didn't want to  
make this post even longer.

Frieda


//////////////////////////////////////

Frieda Reichsman, PhD
Molecules in Motion
Interactive Molecular Structures
http://www.moleculesinmotion.com
413-253-2405

//////////////////////////////////////





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