Dear All,

At http://q4md-forcefieldtools.org/RED/index-test.php, one can see the  
DMSO molecule (Tripos mol2 file format loaded).

I am surprised by the color of the carbons/hydrogens is pink while the  
oxygen/sulfur colors are correct. I guess it is because the name of  
the atoms are the following: C1 H11 H12 H13 S O C2 H21 H22 H23

Does it mean that only the chemical symbols are recognized as atom names ?
So what about atom names in amino-acids such as CA, CB etc...

Thanks, regards, Francois



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