Hi Ewen That's pdb format, right?
I've done a quick test and it's working for me in both 11.4.6 and 11.6.16 Check the column positions of the atom numbers, might be that. Not an explanation for your problem, but you could also dispose of CONECT records and use Jmol "connect" command -- it's cleaner and more flexible (partial bonds for example). And you can embed it in the pdb file if you don't want to run a separate script. http://wiki.jmol.org/index.php/File_formats#Script_inline_within_a_mol ecular_coordinates_file ------------------------------------------------------------------------------ Open Source Business Conference (OSBC), March 24-25, 2009, San Francisco, CA -OSBC tackles the biggest issue in open source: Open Sourcing the Enterprise -Strategies to boost innovation and cut costs with open source participation -Receive a $600 discount off the registration fee with the source code: SFAD http://p.sf.net/sfu/XcvMzF8H _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users

