Dear Bob, > Thanks, can you please add a comment specifically to Jmol users highlighting > how Jmol can be used in relation to this server? Thanks.
The force field libraries (a small molecule or a molecular fragment in the Tripos mol2 file format) generated by the R.E.D. program & by R.E.D. Server can be directly used by Jmol. The Tripos mol2 file format (where atom names, force field atom types and atomic charges are described) can be used to display the corresponding structures as well as these atom names, force field atom types and atomic charges in Jmol. Using these charges, a molecular electrostatic potential can also be calculated by Jmol. These features are widely used on our web sites: Jmol takes even a central role in R.E.DD.B. It is used to display each force field library belonging to a R.E.DD.B. project. The Home pages of R.E.D., R.E.D. Server and R.E.DD.B. use Jmol as well. regards, Francois ------------------------------------------------------------------------------ This SF.net email is sponsored by: High Quality Requirements in a Collaborative Environment. Download a free trial of Rational Requirements Composer Now! http://p.sf.net/sfu/www-ibm-com _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
