Annika Kreuchwig wrote: > First: I was wondering if it is possible to change the pop-up menu or to > avoid that the user is able to download the structure which is provided in > Jmol?
Yes,both. For (1), see http://wiki.jmol.org/index.php/Custom_Menus For (2), see set disablePopupMenu set hideNameInPopUp under http://chemapps.stolaf.edu/jmol/docs/#setvisibility Note, however that since you are coding the whole thing in the html, the user will alwasy be able to find the url for the structure file and download it, even if not directly from within Jmol. Remember, everything you put on the web is accesible. > Second: Is there a possibility to search a structure for motifs? Like DRY > motif but to recognize also similar motifs like ERY, using similarity > matrices for example? I just read how you select a motif (select > within("DRY", *)) but it would be even more interesting for me, if it is > possible to search for similar motifs. The problem is how "similarity" is defined; you will have to do that yourself, Jmol cannot do it since it is not a general problem. For ex., just do select within("DRY", *),within("ERY", *) ------------------------------------------------------------------------------ Crystal Reports - New Free Runtime and 30 Day Trial Check out the new simplified licensing option that enables unlimited royalty-free distribution of the report engine for externally facing server and web deployment. http://p.sf.net/sfu/businessobjects _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users

