Hello list,
I am trying to read an xyz file into Jmol that has a lot of frames. Jmol
doesn't load the file and on the java console I get this error message:
34106 models in this collection. Use getProperty "modelInfo" or getProperty
"auxiliaryInfo" to inspect them.
Exception in thread "QueueThread0" java.lang.ArrayIndexOutOfBoundsException:
-32768
at org.jmol.modelset.ModelLoader.iterateOverAllNewAtoms(Unknown Source)
at org.jmol.modelset.ModelLoader.initializeModelSet(Unknown Source)
at org.jmol.modelset.ModelLoader.<init>(Unknown Source)
at org.jmol.viewer.ModelManager.setClientFile(Unknown Source)
at org.jmol.viewer.Viewer.openClientFile(Unknown Source)
at org.jmol.viewer.Viewer.getOpenFileError(Unknown Source)
at org.jmol.viewer.Eval.load(Unknown Source)
at org.jmol.viewer.Eval.instructionDispatchLoop(Unknown Source)
at org.jmol.viewer.Eval.runEval(Unknown Source)
at org.jmol.viewer.Viewer.evalStringWaitStatus(Unknown Source)
at org.jmol.viewer.ScriptManager$ScriptQueueRunnable.runScript(Unknown
Source)
at
org.jmol.viewer.ScriptManager$ScriptQueueRunnable.runNextScript(Unknown
Source)
at org.jmol.viewer.ScriptManager$ScriptQueueRunnable.run(Unknown Source)
at java.lang.Thread.run(Thread.java:619)
My completely uneducated guess is that Jmol uses a short signed int for the
number of models and that's why it's failing, but of course I might be
completely off here. What is the maximum number of models an xyz file can
have? Can one raise this limit?
Thanks already, nick
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