It may be that there is a problem, but I don't see it on my computer  
which is a MacBook Pro running OS X 10.5.8 and using Safari 4.0.3.   
The animation runs smoothly throughout.


***********************************************
Jeff Hansen
Department of Chemistry and Biochemistry
DePauw University
602 S. College Ave.
Greencastle, IN 46135
[email protected]
***********************************************


On Aug 26, 2009, at 3:06 PM, Eric Martz wrote:

> Jmol's rendering appears to me to become very slow at high zoom, when
> there are many atoms outside the viewport. That is, spinning and
> zooming get slow and jerky. For example,
>
> http://proteopedia.org/wiki/index.php/User:Eric_Martz/Molecular_Playground/Tamiflu
>
> Click the "Play Animation" button. Near the end of the animation, the
> protein appears as green cartoon, at high zoom. Prior to the green
> cartoon appearing, the large spacefilled Tamiflu Drug spins smoothly
> (even tho antialiasdisplay is on). The moment the green cartoon
> appears, spinning becomes slow and jerky. As the molecule zooms down,
> when the entire protein and cartoon are within the viewport, spinning
> and zooming again become much faster and smoother.
>
> My guess is that at high zoom, Jmol is spending lots of time
> rendering structure that is outside the viewport and will not be
> shown. If this guess is correct, would it be feasible to code Jmol to
> skip rendering the out-of-viewport portions, to improve performance?
>
> Thanks, -Eric
>
>
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