I figured out the basics of installing Jmol.js on my own site: http://neurocommons.org/~danc/viz/pg1.html
I can open the console and execute this: load "http://www.rcsb.org/pdb/files/1K5N.pdb"; It works as expected. Then I put an input field with the value 1K5N and a button that calls a javascript function that turns that pdbid into a full URI and tries to run the very same script using... jmolScriptWait('load "' + adr + '";'); It doesn't work; instead, I get: 4,scriptStatus,0,Script completed 6,scriptStatus,0,Jmol script terminated 3,scriptTerminated,1,Jmol script terminated unsuccessfully: script ERROR: java.security.AccessControlException: access denied (java.net.SocketPermission www.rcsb.org:80 connect,resolve) | ----line 1 command 1: | load >> ''http://www.rcsb.org/pdb/files/1K5N.pdb'' << 5,scriptTerminated,1,Jmol script terminated successfully 1,scriptStarted,4,load ''http://www.rcsb.org/pdb/files/1K5N.pdb''; 2,scriptError,0,script ERROR: java.security.AccessControlException: access denied (java.net.SocketPermission www.rcsb.org:80 connect,resolve) | ----line 1 command 1: | load >> ''http://www.rcsb.org/pdb/files/1K5N.pdb'' << Then I added a jmolCommandInput() to the page; putting load "http://www.rcsb.org/pdb/files/1K5N.pdb"; in there works fine. I'm stumped. Help?!?! -- Dan Connolly, W3C http://www.w3.org/People/Connolly/ consultant, Midwest Web Sense http://www.midwestwebsense.com/ gpg D3C2 887B 0F92 6005 C541 0875 0F91 96DE 6E52 C29E ------------------------------------------------------------------------------ Come build with us! The BlackBerry® Developer Conference in SF, CA is the only developer event you need to attend this year. Jumpstart your developing skills, take BlackBerry mobile applications to market and stay ahead of the curve. Join us from November 9-12, 2009. Register now! http://p.sf.net/sfu/devconf _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users

