you are sending the jmolScript command before you have the applet set up. If
all you are doing is sending the same startup script to the two applets,
just do it as I have modified below:

On Fri, Dec 4, 2009 at 10:51 AM, Brian Moldover <[email protected]> wrote:

> Getting the error message: could not find applet jmolApplet0
>
> Here is the code:
> <head>
>   <title>Multiple load models from pdb</title>
>   <script type="text/javascript" src="jmol/Jmol.js" ></script>
> </head>
> <body>
>
> <script type="text/javascript">
>       jmolInitialize("jmol");
> </script>
>
>     <script type="text/javascript">
>       jmolApplet(200, "load MODELS ({0}) jmol/pdb1as5.pdb;script
> jmol/Gcolors.txt", "1");
>     </script>
>
>     <script type="text/javascript">
>       jmolApplet(200, "load MODELS ({1}) jmol/pdb1as5.pdb;script
> jmol/Gcolors.txt", "2");
>     </script>
>
>
> On Fri, Dec 4, 2009 at 11:26 AM, Brian Moldover <[email protected]>wrote:
>
>>  Thanks, could not find the right example for jmolscript. Was struggling
>> with trying to use jmolscript(script “filename”, “all”) which obviously is
>> incorrect!
>>
>>
>>
>> *From:* Robert Hanson [mailto:[email protected]]
>> *Sent:* Friday, December 04, 2009 11:21 AM
>> *To:* [email protected]
>> *Subject:* Re: [Jmol-users] running a rasmol script
>>
>>
>>
>> within Jmol:
>>
>> script APPLET * "background red"
>>
>> applies the script to all applets. So from JavaScript:
>>
>> jmolScript('script APPLET * "background red" ')
>>
>> or, if this is in a file:
>>
>> jmolScript('script APPLET * "script myfile.spt" ')
>>
>> or if you need quotes for that filename....
>>
>> jmolScript('script APPLET * \'script "myfile.spt" \' ')
>>
>> On Fri, Dec 4, 2009 at 10:07 AM, Brian Moldover <[email protected]>
>> wrote:
>>
>> Hi all,
>>
>>
>>
>> Is there a way to load a long rasmol-type script so that it can be applied
>> to multiple applets? I have a number of atom colorations for each model, and
>> in the script I use restrict */n and then the atom colors, cycling  (n)
>> through each model. I’m using jmolapplet(“load MODELS ({}) “filename.pdb”).
>>
>>
>>
>> -          Brian
>>
>>
>>
>> ------------------------------------------------------------------------------
>> Join us December 9, 2009 for the Red Hat Virtual Experience,
>> a free event focused on virtualization and cloud computing.
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>> _______________________________________________
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>>
>>
>>
>>
>> --
>> Robert M. Hanson
>> Professor of Chemistry
>> St. Olaf College
>> 1520 St. Olaf Ave.
>> Northfield, MN 55057
>> http://www.stolaf.edu/people/hansonr
>> phone: 507-786-3107
>>
>>
>> If nature does not answer first what we want,
>> it is better to take what answer we get.
>>
>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>>
>> Internal Virus Database is out of date.
>> Checked by AVG - www.avg.com
>> Version: 8.5.238 / Virus Database: 270.14.84/2530 - Release Date: 11/27/09
>> 07:58:00
>>
>
>
>
> ------------------------------------------------------------------------------
> Join us December 9, 2009 for the Red Hat Virtual Experience,
> a free event focused on virtualization and cloud computing.
> Attend in-depth sessions from your desk. Your couch. Anywhere.
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> _______________________________________________
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>
>


-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
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