Jonathan, Here's an easy improvement -- use antialiasdisplay. It looks REALLY nice with those graphs.
Say, is that a custom menu? One of the reasons that they might want to use Jmol 11.9.12 is that it includes the capability of drawing the intersection of an isosurface with a plane. That means that they could be drawing lines on the surface that correspond with x, y, and/or z values. For example, isosurface iso1 PMESH "xxxxx.pmesh" .... (isosurface and pmesh were merged in Jmol 11.7.12) then draw line1 width 0.1 intersection $iso1 x=1 draw line2 width 0.1 intersection $iso1 x=2 draw line3 width 0.1 intersection $iso1 x=3 etc. would draw the expected contour lines. A set of these in two directions would produce a standard grid-like mapping onto the pmesh. These lines, because they are draw objects, could be sized and colored appropriately and look very classy. Bob On Tue, Dec 15, 2009 at 5:13 PM, Robert Hanson <[email protected]> wrote: > cool! First thing to do is upgrade to Jmol 11.9.12. This will allow you > much flexibility in terms of contour lines. 11.8 is not going to get you > anywhere further than this. > > Bob > > > On Tue, Dec 15, 2009 at 5:07 PM, Jonathan Gutow <[email protected]> wrote: > >> Dear Jmol Users, >> I'm trying to help the SAGEmath community update their usage of >> Jmol >> for viewing 3-D plots. The link below will take you to a published >> sample on my local server. I also use this for classes so it is a >> secure server with a self-signed certificate. This means you will >> get lots of warnings about possible security problems, just accept >> them to get a look. Being a secure server and running on an old >> resurrected machine it may respond a little slowly at initial load, so >> please be patient. >> >> I'd really appreciate comments from the Jmol community on what >> things might be nice to put in the web interface. >> >> LINK: https://141.233.197.45:4443/home/pub/0 >> >> Thanks, >> Jonathan >> Dr. Jonathan H. Gutow >> Chemistry Department [email protected] >> UW-Oshkosh Office:920-424-1326 >> 800 Algoma Boulevard FAX:920-424-2042 >> Oshkosh, WI 54901 >> http://www.uwosh.edu/facstaff/gutow >> >> >> >> >> >> >> >> ------------------------------------------------------------------------------ >> This SF.Net email is sponsored by the Verizon Developer Community >> Take advantage of Verizon's best-in-class app development support >> A streamlined, 14 day to market process makes app distribution fast and >> easy >> Join now and get one step closer to millions of Verizon customers >> http://p.sf.net/sfu/verizon-dev2dev >> _______________________________________________ >> Jmol-users mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> > > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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