On Tue, 19 Jan 2010 14:03:32 -0600, Robert Hanson <hans...@stolaf.edu>
wrote:
> Is that in the file somewhere? What I have is
> 
> dmin dmax dmean  (density min max mean)
> 
> rms
> 
> Now, I DON'T think the "rms" is really "rms" -- I think it's rms
deviation,
> but I could be wrong about that. What seems to work as a reasonable
default
> is
> 
> dmean + 2*rms
> 
> But that could be a complete misuse of the numbers.
> 
> OK, Brian -- we want an answer from you, then! How do we do this? :)
> 

1 sigma = 1 esd = 1 rmsd*rmsd

i.e. the rmsd is the square root of the esd

so to contour the map at 2.5 sigma: square the rmsd and multiply by 2.5
and plot lines from dmin to dmax at that interval.

Rich 

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