On 23-1-2010 11:31, Angel Herráez wrote: > You have a point, Rich, but what kind of options could we have for nonprotein > molecules? > There is select by element and by symmetry already. The list of selectable > elements could > be certainly expanded (ideally, to cover all elements present in the model, > as it is done for > amino acids). > > The whole business of residue name and chemical nature is tied to proteins > and nucleic > acids. > > The atom expressions are documented at http://wiki.jmol.org/index.php/AtomSets > > I am going to collect bits of thought and proposals at a new > http://wiki.jmol.org/index.php/AtomSets/Popup_Menu > > please, feel free to add any comments there (maybe in the Talk page if you > don't want to > insert actual content)
The minimum selection functions that I'd like to see are: Select: by element, as setup now add to selection (so that selecting N doesn't deselect the previous selection select all non-H (I know this can be done by selecting H and then inverting but a single step is better) select all C H O N in a single step select one atom and then grow that to all the other connected atoms (useful when more than one molecule is in the asymmetric unit and for included solvents, ions) Rich ------------------------------------------------------------------------------ Throughout its 18-year history, RSA Conference consistently attracts the world's best and brightest in the field, creating opportunities for Conference attendees to learn about information security's most important issues through interactions with peers, luminaries and emerging and established companies. http://p.sf.net/sfu/rsaconf-dev2dev _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
