Hmm, the show files command at jena3D does work well for me. I wonder, though,
that since the jmol file was loaded from server side (as opposed to client
side), that you can pass file contents freely to js scripts.
> Date: Mon, 22 Feb 2010 18:53:19 +0100
> From: [email protected]
> To: [email protected]
> Subject: Re: [Jmol-users] how to recompile jmolapplet
>
> On 02/22/2010 06:33 PM, rob yang wrote:
> >
> >> So you would have to replace the command
> >> 'jmolGetPropertyAsString("image")' by a command to get the file content.
> >>
> >> If you were lucky it would be 'jmolGetPropertyAsString("file")'. I don't
> >> know it. But I am rather sure that there is some way to get the file
> >> information into a Javascript variable.
> >>
> >> The only problem I observed here was the data size. There seems to be
> >> some system dependent security restriction in the amount of data
> >> transferred from Jmol to the browser.
> >
> > Okay, I did try this route, it was jmolGetPropertyAsString("filecontents").
> > As part of the new-age browser security, this was actually not allowed by
> > safari and ff3 either (seems to be independent of length) either although
> > getting the path of the filename was allowed. So it still stands that
> > jmol->server is the only plaussible route for me. Thanks Rolf.
> >
> Does the Jena3D snapshot button work for you in the new-age browsers you
> mean? I didn't observe any problems (except with size) up to Firefox 3.6
> and IE8.
>
> So it is likely the specific way
> 'jmolGetPropertyAsString("filecontents")' works that is the problem. But
> there are other ways to get the file data. There is for example the
> "show file" command. At least with PDB files it displays the whole file
> content. You can try if this works with those browsers by typing the
> command into the script input field within Jena3D. Then the file content
> should be displayed in the log area. It might be clipped there because
> the log area has a size limit. Only the last 'n' log lines are shown.
>
> So with a message callback function that parses the file content out of
> the message stream you should be able to get it into a Javascript
> variable. But there might exist other simpler methods.
>
> Regards,
> Rolf
>
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