On 6/25/2010 2:42 PM, Angel Herráez wrote:
It is probably true on a desktop, but I do not think this is correct on a server. If a MIME type is not
set, a file like.smol (or even jvxl) will not be read by the web app.
I'm quite sure of this: Jmol does not care about MIME type. It may be that your server serves
the files in a different way depending on their type, but I've never seen such a problem with
Jmol. Remember that the web page does not link to or request the file, it is Jmol who does.
I've used free (restricted) servers that don't allow me to upload a certain file type based on
their extension, but MIME or Jmol have nothing to do there. By the way, try renaming the file
e.g. to molecule.smol.txt. I've used that trick successfully with pdb files.
Also, consider that Jmol reads both plian text files (like mol or pdb) and binary files (e.g.
gzipped files) Are smol files binary?.
For Jmol it may not matter what the file is, but somehow the server does
not know (without file extension association) that a file (smol or even
jvxl) should be served to Jmol. Since the association asks for MIME
type, I thought I have it set "correctly". I was hoping somebody would
know the true MIME for smol.
[...]
Sorry I cannot help with the details of file parsing (when vibration and surfaces are there).
Bob Hanson is your man for that; wait for his reply (or investigate the file reader yourself
http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/src/org/jmol/adapter/readers/quantum/
I have just started using Jmol and my plan was to be only the
"end-user". I will keep my fingers crossed and hope that somebody will
be able to provide more guidance on smol files with multiple surfaces
and vibrations.
Thank you for all your help!
PM
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