Bob, This is a point of information that you may already know. I just discovered it, so I'll point it out just in case it's new information to you or other JME users.
When the JME editor creates a molfile with JME.molFile(), it saves the same stereo information contained in the SMILES and the proprietary JME file. Where the JME file uses -1(up) and -2(down), the JME created molfile puts a 1(up) and 6(down, go figure) in the connection table's first extra info column, next to the bond in question. JME uses this information when it reconstructs a 2D drawing with the JME.readMolFile(str) function. In all of my playing, I simply missed this point until now. Otis -- Otis Rothenberger chemagic.com ------------------------------------------------------------------------------ This SF.net email is sponsored by Sprint What will you do first with EVO, the first 4G phone? Visit sprint.com/first -- http://p.sf.net/sfu/sprint-com-first _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
