Again, never do this! (same reason, and in MSIE the applet will not
ever be loaded before the prompt returns)
UseCommandThread probably shouldn't be played with, either.
<script type = "text/javascript">
jmolInitialize("../jmol","JmolApplet.jar");
//jmolInitialize("../jmol","JmolApplet.jar");
jmolSetCallback("UseCommandThread","true");
</script>
<script>
var script = 'load Structures/molecule4.pdb';
jmolApplet([500,500],script);
</script>
<script>
alert("Load another structure");
var script2 = 'load Structures/chlorophyll.pdb';
jmolScript(script2);
</script>
On Fri, Jul 23, 2010 at 10:12 AM, Philip Bays <[email protected]> wrote:
> I have now loaded three files onto my campus server: ST1.html, ST2.html,
> and ST3.html. The files are identical except that I have commented out, or
> in, various script lines.
>
> ST1: A simple load of a molecule into a jmol applet followed by an alert,
> dismissal of which allows another molecule to be loaded.
>
> ST2: Same as ST1 except that I have added:
> jmolSetCallback("UseCommandThread","true");
>
> ST3: Same as ST1 except that I now use the signed applet.
>
> My Observations:
> All three files work fine with all browsers on a PC and all non-Mozilla
> browsers on the Mac.
>
> I am looking at Firefox (the most important), SeaMonkey, and Camino of the
> Mozilla implementations.
>
> For Firefox -- browser and java cache cleared:
> When you run ST1, the first structure loads fine, the second gives a file
> access error. Both
> structure files are located in the same place, and I have demonstrated
> the same results
> if I put the structure files into the jmol directory. It is not a file
> location issue.
> ST2 and ST3 work fine.
> If you run either ST2 or ST3 followed immediately by ST1, then ST1 works
> fine. (caching issue?) But
> if you close firefox, without clearing either caches, you are back to the
> same issue with ST1.
>
> SeaMonkey works the same as Firefox.
>
> Camino
> For all three files, camino never displays the applet for the first
> structure. The java console tells me the
> applet has been initiated and the molecule has been loaded, but neither is
> displayed.
> The second structure is displayed in an applet of SP2 and SP3, but the
> access error is displayed for SP1.
>
> URL's, particularly for a person using a Mac.
>
> www.saintmarys.edu/~pbays/JStest/HTMLFiles/ST1<http://www.saintmarys.edu/%7Epbays/JStest/HTMLFiles/ST1>
> (or ST2 or ST3)
>
> Having said all of this, I just downloaded the latest release of jmol and
> it does not seem to work for any of these, but I do not have time at the
> moment to check it out for sure.
>
> Phil
>
>
>
> J. Philip Bays
>
> Professor of Chemistry
>
> Science Hall 172
>
> Saint Mary's College
>
> Notre Dame IN 46556
>
> (574) 284-4663
>
>
>
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>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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