In case that was too cryptic. 0) get the picture you want. 1) create the jvxl file: write "xxx.jvxl" 2) replace the surface with the jvxl equivalent: isosurface "xxx.jvxl" 3) create a manifested zip file: write "xxx.jmol"
Then when you load xxx.zip, Jmol should load the file, load the surface, and display it all exactly the way you had it. If it doesn't, let me know. Bob On Thu, Aug 19, 2010 at 11:30 AM, Robert Hanson <[email protected]> wrote: > write xxx.zip > > > > > On Mon, Aug 16, 2010 at 4:44 AM, <[email protected]> wrote: > >> Dear Jmol, >> >> Is there a way to save Jmol state with the pre-calculated surface? >> >> We can save the Jmol state, and render the structure with the same >> look, orientation, etc. However, if the state contains a surface >> calculation, the surface is recalculated again on load. >> >> On the other side, I can save to .jvxl the surface alone ... >> >> Can we combine both? >> Or the option is to reload state and then load jvxl? >> >> Thanks, >> Jaim >> -- >> Dr Jaime Prilusky | [email protected] >> Head Bioinformatics | >> R&D Bioinformatics and Data Management | >> Department of Biological Services | >> Weizmann Institute of Science | fax: 972-8-9344113 >> 76100 Rehovot - Israel | tel: 972-8-9344959 >> >> OCA, http://oca.weizmann.ac.il (the protein structure/function database) >> Proteopedia, http://proteopedia.org (because life has more than 2D) >> ------------------------------------------------------------------------ >> >> >> ------------------------------------------------------------------------------ >> This SF.net email is sponsored by >> >> Make an app they can't live without >> Enter the BlackBerry Developer Challenge >> http://p.sf.net/sfu/RIM-dev2dev >> _______________________________________________ >> Jmol-users mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> > > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > -- Robert M. Hanson Professor of Chemistry St. Olaf College 1520 St. Olaf Ave. Northfield, MN 55057 http://www.stolaf.edu/people/hansonr phone: 507-786-3107 If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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