I am afraid that some things did not get resolved in the new versions. Below is the list.
PM Run-times (approximate, from pressing "run" till surface is shown, all on the same desktop computer, no server involved) isosurface peskin3 cutoff 0.05 resolution 3 phase color darkred darkblue atomicOrbital 3 1 0 1.0 12.1.8 4 s 12.0.10 4 s 12.0.8: 9 s 11.8.24: 2s (or less) isosurface peskin3 cutoff 0.05 resolution 7 phase color darkred darkblue atomicOrbital 3 1 0 1.0 12.1.8 40 s 12.0.10 43 s 12.0.8: 100 s 11.8.24: 17s All 12.xx are slower than 11.8.24, more than 2 times _______________________________________________________________ jvxl file reading not fixed in 12.0.10 and 12.1.8 Isosurfaces generated in 11.8.24 from smol (Spartan) file cannot be read in any of the 12 versions,. The molecular coordinates can be loaded if FILTER noOrient is used, attempts to load without filter, or attempts to load the isosurface freeze Jmol (12.0.8. 12.0.10, and 12.1.8) Symptoms described previously (Bob, I e-mailed you the test file eplot11.jvxl). _________________________________________________________________ [set drawHover true]; isosurface escontour plane xy contour 30 atomicOrbital 1 0 0 1.0 in.11.8.24 contour lines draw; can be read without set drawhover true [square bracket indicate that the script was run with and without that command] in 12.0.8 works fine; contours can be read with set drawHover true (the values are slightly higher than those in 11.8.24) in 12.0.10 and 12.1.8 three extra long triangles displayed and unfinished contour corners; contour values not shown with or without set drawHover true; contour in the center have different color than in the 11.8.24 and 12.0.8 __________________________________________________________________ [st drawHover true]; isosurface escross color absolute -0.01 0.9 plane xy resolution 6 atomicOrbital 1 0 0 1.0 in 11.8.24, circular color-filled contours produced with values read on color boundaries without set drawHover true in 12.0.8 circular color contours produced with values read on contour boundaries only with set drawHover true; values slightly higher than those in 11.8.24 in 12.0.10 and 12.1.8 the largest contour is square, an there is a "hole" in the middle, the surface looks different, the values do not show with set drawHover ------------------------------------------------------------------------------ Sell apps to millions through the Intel(R) Atom(Tm) Developer Program Be part of this innovative community and reach millions of netbook users worldwide. Take advantage of special opportunities to increase revenue and speed time-to-market. Join now, and jumpstart your future. http://p.sf.net/sfu/intel-atom-d2d _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
