I found a solution to my problem with Export to Jmol. When I looked at the
html file (in both cases I've seen so far) it contained the following.
<pre>Using directory /Users/andrewpfaff/Desktop/Jmol_ASP/JmolAssignment
adding JmolPopIn.js
...jmolApplet0
...adding CpkColored1BF3WithLigand.png
Could not find or open:
file:/Users/andrewpfaff/Desktop/Jmol_ASP/JmolAssignment/1BF3.pdb
...adding CpkColored1BF3WithLigand.spt
...jmolApplet1
...adding BlueHydrophobicGreenPolar1BF3.png
Could not find or open:
file:/Users/andrewpfaff/Desktop/Jmol_ASP/JmolAssignment/1BF3.pdb
...adding BlueHydrophobicGreenPolar1BF3.spt
...jmolApplet2
...adding ChargedResidues1BF3WithLigand.png
Could not find or open:
file:/Users/andrewpfaff/Desktop/Jmol_ASP/JmolAssignment/1BF3.pdb
...adding ChargedResidues1BF3WithLigand.spt
...jmolApplet3
...adding 1BF3SidechainsWithin10AOfLigand.png
Could not find or open:
file:/Users/andrewpfaff/Desktop/Jmol_ASP/JmolAssignment/1BF3.pdb
...adding 1BF3SidechainsWithin10AOfLigand.spt
</pre>
When I deleted it, restarted my browser and opened the page again, it was fine.
Any ideas where this came from?
***********************************************
Jeff Hansen
Department of Chemistry and Biochemistry
DePauw University
602 S. College Ave.
Greencastle, IN 46135
[email protected]
***********************************************
------------------------------------------------------------------------------
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Spend less time writing and rewriting code and more time creating great
experiences on the web. Be a part of the beta today.
http://p.sf.net/sfu/beautyoftheweb
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