Hi Robert,

Do you mean that I can pass a value from Jmol back to the server by having the 
following?
jmolScript("load ...", 0)

But I am a bit confused. I though the load() function is used to load data from 
a file into Jmol. 
How should I pass a variable back to the server with it?

Thank you.

Yingjie

> Message: 6
> Date: Wed, 23 Mar 2011 19:08:47 -0500
> From: Robert Hanson <[email protected]>
> Subject: Re: [Jmol-users] Problem while writing state to file in
>       JmolApplet
> To: [email protected]
> Message-ID:
>       <[email protected]>
> Content-Type: text/plain; charset="iso-8859-1"
> 
> That said, think about your overall information model. The most efficient
> use of Jmol is via calculations in the client using JavaScript or even just
> JmolScript.
> 
> On Wed, Mar 23, 2011 at 7:07 PM, Robert Hanson <[email protected]> wrote:
> 
>> You can also just use the applet itself to pass data back to the server.
>> Just use the load() function in Jmol script. No need for AJAX with that.
>> Remember, AJAX was designed with JavaScript in mind, not Java. Java already
>> has the capability to communicate with your server.
>> 
>> Bob
>> 
>> 
>> On Tue, Mar 22, 2011 at 5:21 PM, Oliver Stueker <
>> [email protected]> wrote:
>> 
>>> Hi Yingjie,
>>> 
>>> keep in mind that the Jmol Applet is executed inside the Browser of
>>> the user whereas your python script runs on the webserver.
>>> So you'll need to communicate data from the client back to the server.
>>> 
>>> The first step would be passing the data that you need from the
>>> Java-Applet into the JavaScript (inside the Browser).
>>> This can be done by e.g. PickCallbacks (or similar) or you can
>>> probably assign the content of the state-file to a JavaScript variable
>>> (as a string).
>>> 
>>> The second step would be to pass that information back to the webserver.
>>> With JavaScript you can assign the data you want to transfer to a
>>> <input type="hidden"> inside a <form ... method="post"> which will
>>> send the data to the server when the form is submitted. If using a
>>> form is too Web 1.0 for you, I'm sure you can also use an AJAX
>>> framework to send the data to the server.
>>> 
>>> Oliver
>>> 
>>> On Tue, Mar 22, 2011 at 15:47, Yingjie Lin <[email protected]> wrote:
>>>> Hi Jmol users,
>>>> I am developing a web server with Jmol Applet (Jmol version 12.0.22). I
>>> need
>>>> the user to select a set of atoms by, say, coloring them red. When the
>>> user
>>>> is done selecting and is ready to move on to the next page, I would like
>>> my
>>>> Python script to know which atoms are selected.
>>>> I think this could be done by saving the Jmol display to a file, using
>>>> "write STATE filename.spt". This works perfectly in the Jmol program
>>>> itself, but I couldn't get it to work in Jmol Applet. In Jmol Applet,
>>> there
>>>> is no error message, but no file is written, and the content of the
>>> state
>>>> file is printed to the Console.
>>>> Does anyone know what I am missing here?
>>>> Thank you.
>>>> Yingjie
>>> 
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