Sara—use the Jmol script command...
select sulfur and connected(sulfur);
You may be able to use the scriptCallback or messgeCallback of this command
to see what was selected; what I know works is to then use
show selected;
to spit out selected atoms. If you get anything back, you know disulfide
bonds are present.
Cheers, Mike
On Fri, Aug 5, 2011 at 2:28 PM, Sara Bonner <[email protected]> wrote:
> Hi
>
> Is it possible to check for disulfide bonds when loading a pdb file?
>
> Thanks
> Sara
>
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--
Mike Evans
Organic Chemistry Graduate Student
Moore Group
University of Illinois, Urbana-Champaign
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