Annemarie,
You probably picked up a development version of Jmol. Is that possible?
I've checked in a correction when you use FILTER "TLS" that might have been
causing this, but I'm not sure if that's really the problem.
On Tue, Nov 1, 2011 at 8:42 AM, Robert Hanson <[email protected]> wrote:
> That's not the range, that's the PDB file. What is the source of this
> file? Does it do the same with the following?
>
> load =3NOC {1 1 1} range -6
>
>
> Here's what I see:
> $ show _version
> _version = 1202004
> $ load =3NOC {1 1 1} range -6
> TRANSPORT PROTEIN/PROTEIN BINDING 25-JUN-10 3NOC
> DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) BINDERS TO ACRB: PLASTICITY
> OF THE INTERFACE
>
> 2 atoms selected
> 49,055 atoms selected
> 1,165 atoms selected
> 51,839 atoms selected
>
> So I think it's definitely working. Something else is odd with your file.
> Can you send me that, if it is not the RCSB version?
>
> Bob
>
>
>
> On Tue, Nov 1, 2011 at 7:52 AM, Annemarie Honegger
> <[email protected]>wrote:
>
>> Hi!
>>
>> With the most recent versions of jmol (12.2.2, 12.2.3), commands like
>> "load 3NOC.pdb {1 1 1} range -6;" no longer work,
>> (any use of the "range" parameter with "load",
>>
>> they lead to an error message of
>>
>> script ERROR: Unexpected end of file after line 52252:
>> END
>> for file file:3NOC.pdb
>> type Pdb
>>
>> both with jmol.jar and with the applet embedded in a web.page
>>
>> The same scripts worked fine with older versions, and worked again once I
>> replaced the updated jmol with Version 11.9.6
>>
>> can you please check what went wrong?
>>
>> Thank you very much
>>
>>
>> Annemarie Honegger
>>
>> ________________________________________________________
>>
>> Dr. Annemarie Honegger, Ph.D.
>> Zürich University, Dept. of Biochemistry
>> Winterthurerstr.190
>> CH-8057 Zürich
>> Switzerland
>>
>> e-mail: [email protected]
>> Tel.: 41-44-635 55 62
>> Fax: 41-44-635 57 12
>> URL: http://www.bioc.uzh.ch/antibody
>> URL: http://www.bioc.uzh.ch/nanowelt
>> _______________________________________________________
>>
>>
>>
>>
>>
>>
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>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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